Crystal Structure of SOD2 from Saccharomyces cerevisiae
Sheng, Y., Cascio, D., Valentine, J.S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Superoxide dismutase [Mn], mitochondrial | 207 | Saccharomyces cerevisiae | Mutation(s): 0  Gene Names: SOD2, YHR008C EC: 1.15.1.1 | ||
UniProt | |||||
Find proteins for P00447 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P00447  Go to UniProtKB:  P00447 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00447 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | G [auth B], J [auth C], L [auth D], M [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MN Query on MN | E [auth A], F [auth B], H [auth C], K [auth D] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N | |||
NA Query on NA | I [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MLY Query on MLY | A, B, C, D | L-PEPTIDE LINKING | C8 H18 N2 O2 | LYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 63.657 | α = 109.36 |
b = 64.933 | β = 106.35 |
c = 66.55 | γ = 109.68 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
CrystalClear | data collection |