3LKU

Crystal structure of S. cerevisiae Get4 in complex with an N-terminal fragment of Get5

Structural Biology Knowledgebase: 3LKU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.182

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3LKU

Classification: PROTEIN BINDING

Total Structure Weight: 121778.09

Macromolecule Entities
Molecule Chains Length Organism Details
UPF0363 protein YOR164C A, C, E 292 Saccharomyces cerevisiae Fragment: UNP residues 11-300
Gene Name(s): GET4 Gene View YOR164C O3580
Ubiquitin-like protein MDY2 B, D, F 54 Saccharomyces cerevisiae Fragment: UNP residues 3-56
Gene Name(s): MDY2 GET5 TMA24 YOL111C

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PRO
Query on PRO

A, E PROLINE
C5 H9 N O2
ONIBWKKTOPOVIA-BYPYZUCNSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, C, E L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.182
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 108.73 α = 90.00
b = 108.73 β = 90.00
c = 169.81 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-01-27
  • Released Date: 2010-06-23
  • Deposition author(s): Chartron, J.W., Clemons Jr., W.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4