3L8X

P38 alpha kinase complexed with a pyrazolo-pyrimidine based inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.319
  • R-Value Work: 0.225

Literature

Macromolecules
Sequence Display for 3L8X

Classification: TRANSFERASE

Total Structure Weight: 42463.40

Macromolecule Entities
Molecule Chains Length Organism Details
Mitogen-activated protein kinase 14 A 366 Homo sapiens EC#: 2.7.11.24 IUBMB
Gene Name(s): MAPK14 Gene View CSBP CSBP1 CSBP2 CSPB1 MXI2 SAPK2A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
N4D
Query on N4D

A N,4-dimethyl-3-[(1-phenyl-1H-pyrazolo[3,4- d]pyrimidin-4-yl)amino]benzamide
C20 H18 N6 O
OYTBZXSFNNAVKU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
N4D IC50: 10 nM (100) BindingDB

IC50: 10 nM  BindingMOAD
Kd: 10 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.319
  • R-Value Work: 0.225
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 67.39 α = 90.00
b = 71.15 β = 90.00
c = 73.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-01-04
  • Released Date: 2010-03-02
  • Deposition author(s): Sack, J.S.
  • This entry supercedes: 3CG2

Revision History

  • Version 1_0: 2010-03-02

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance