3JBK

Cryo-EM reconstruction of the metavinculin-actin interface


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.2 Å
  • Aggregation State: Filament
  • Reconstruction Method: Helical

Literature

Macromolecules
Sequence Display for 3JBK

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 114506.52

Macromolecule Entities
Molecule Chains Length Organism Details
Actin, alpha skeletal muscle A, B 375 Oryctolagus cuniculus Gene Name(s): ACTA1 Gene View ACTA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metavinculin M 273 Homo sapiens Fragment: tail domain (UNP residues 858-1129)
Gene Name(s): VCL Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A, B ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.2 Å
  • Reconstruction Method: Helical

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-09-03
  • Released Date: 2015-11-04
  • Deposition author(s): Kim, L.Y., Thompson, P.M., Lee, H.T., Pershad, M., Campbell, S.L., Alushin, G.M.

Revision History

  • Version 1_0: 2015-11-04

    Type: Initial release

  • Version 1_1: 2016-02-17

    Type: Database references