3IF9

Crystal structure of Glycine Oxidase G51S/A54R/H244A mutant in complex with inhibitor glycolate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 3IF9

Classification: OXIDOREDUCTASE

Total Structure Weight: 174245.69

Macromolecule Entities
Molecule Chains Length Organism Details
Glycine oxidase A, B, C, D 382 Bacillus subtilis EC#: 1.4.3.19 IUBMB
Mutation: G51S, A54R, H244A
Gene Name(s): thiO goxB yjbR BSU11670
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B, C, D FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOA
Query on GOA

A, B, C, D GLYCOLIC ACID
HYDROXYACETIC ACID; HYDROXYETHANOIC ACID (Synonym)
C2 H4 O3
AEMRFAOFKBGASW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.196
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 72.34 α = 90.00
b = 215.06 β = 90.00
c = 217.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-07-24
  • Released Date: 2009-10-27
  • Deposition author(s): Pedotti, M., Rosini, E., Molla, G., Moschetti, T., Vallone, B., Savino, C., Pollegioni, L.

Revision History

  • Version 1_0: 2009-10-27

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2012-12-26

    Type: Database references