3I0U

Structure of the type III effector/phosphothreonine lyase OspF from Shigella flexneri


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.250

Literature

Macromolecules
Sequence Display for 3I0U

Classification: LYASE

Total Structure Weight: 50959.63

Macromolecule Entities
Molecule Chains Length Organism Details
Phosphothreonine lyase ospF A, B 218 Shigella flexneri EC#: 4.2.3 IUBMB
Fragment: OspF residues 23-239
Gene Name(s): ospF mkaD CP0010 pWR501_0013 SFLP011
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.250
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 62.13 α = 90.00
b = 62.13 β = 90.00
c = 239.59 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-06-25
  • Released Date: 2009-09-01
  • Deposition author(s): Singer, A.U., Skarina, T., Nocek, B., Gordon, R., Lam, R., Kagan, O., Edwards, A.M., Joachimiak, A., Chirgadze, N.Y., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2011-07-13
    Type: Advisory, Version format compliance