3HGR

Crystal structure of tomato OPR1 in complex with pHB


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.203

Literature

Macromolecules
Sequence Display for 3HGR

Classification: OXIDOREDUCTASE

Total Structure Weight: 86075.00

Macromolecule Entities
Molecule Chains Length Organism Details
12-oxophytodienoate reductase 1 A, B 376 Solanum lycopersicum EC#: 1.3.1.42 IUBMB
Mutation: R142M
Gene Name(s): OPR1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PHB
Query on PHB

A, B P-HYDROXYBENZOIC ACID
C7 H6 O3
FJKROLUGYXJWQN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.203
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 53.44 α = 63.09
b = 71.99 β = 84.45
c = 72.04 γ = 78.06

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-05-14
  • Released Date: 2009-08-25
  • Deposition author(s): Clausen, T., Breithaupt, C.

Revision History

  • Version 1_0: 2009-08-25

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance