3HGM

Universal Stress Protein TeaD from the TRAP transporter TeaABC of Halomonas elongata

Structural Biology Knowledgebase: 3HGM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.218

Literature

Macromolecules
Sequence Display for 3HGM

Classification: SIGNALING PROTEIN

Total Structure Weight: 65111.87

Macromolecule Entities
Molecule Chains Length Organism Details
Universal Stress Protein TeaD A, B, C, D 147 Halomonas elongata Gene Name(s): teaD HELO_4277
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, B, C, D ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
ATP N/A in BindingDB
Kd: 800 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.218
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.05 α = 90.00
b = 74.65 β = 90.00
c = 97.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-05-14
  • Released Date: 2010-03-02
  • Deposition author(s): Schweikhard, E.S., Kuhlmann, S.I., Ziegler, C.M.

Revision History

  • 2014-11-12
    Type: Function and keywords | Details: --
  • 2014-02-12
    Type: Citation | Details: Citation update
  • 2014-02-12
    Type: Sequence database correspondence | Details: DBREF update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4