3H8S

Structure of D19N T4 RNase H in the presence of divalent magnesium


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 3H8S

Classification: HYDROLASE

Total Structure Weight: 35634.23

Macromolecule Entities
Molecule Chains Length Organism Details
Ribonuclease H A 305 Escherichia virus t4 EC#: 3.1.26.4 IUBMB
Mutation: D19N
Gene Name(s): rnh 33.2 das
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.190
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 53.31 α = 90.00
b = 75.30 β = 90.00
c = 88.09 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-29
  • Released Date: 2010-05-12
  • Deposition author(s): Tomanicek, S.J., Mueser, T.C.

Revision History

  • Version 1_0: 2010-05-12

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-11-01

    Type: Refinement description