3H4Z

Crystal Structure of an MBP-Der p 7 fusion protein

Structural Biology Knowledgebase: 3H4Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.249

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3H4Z

Classification: ALLERGEN

Total Structure Weight: 188097.48

Macromolecule Entities
Molecule Chains Length Organism Details
Maltose-binding periplasmic protein fused with Allergen DERP7 A, B, C 568 Escherichia coli Dermatophagoides pteronyssinus Mutation: D82A, K83A, E172A, N173A, K239A, E359A
Gene Name(s): malE b4034 JW3994 DERP7

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GLC
Query on GLC

A, B, C ALPHA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-DVKNGEFBSA-N
Ligand Explorer
 
JSmol
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.249
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 193.35 α = 90.00
b = 117.90 β = 114.06
c = 92.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-21
  • Released Date: 2010-03-31
  • Deposition author(s): Pedersen, L.C., Mueller, G.A., London, R.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4