3H3P

Crystal structure of HIV epitope-scaffold 4E10 Fv complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 3H3P

Classification: IMMUNE SYSTEM

Total Structure Weight: 75078.09

Macromolecule Entities
Molecule Chains Length Organism Details
Fv 4E10 heavy chain H, I 137 Homo sapiens
Fv 4E10 light chain L, M 114 Homo sapiens
4E10_S0_1TJLC_004_N S, T 85 Synthetic construct Details: The author states that THE EPITOPE-SCAFFOLD IS BASED on transcription factor DksA from E. coli (PDB ID 1TJL).

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

H CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.229
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 92.40 α = 90.00
b = 92.40 β = 90.00
c = 272.79 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-16
  • Released Date: 2010-01-19
  • Deposition author(s): Holmes, M.A.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4