3G0S

Dihydrodipicolinate synthase from Salmonella typhimurium LT2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.190
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 3G0S

Classification: LYASE

Total Structure Weight: 68518.36

Macromolecule Entities
Molecule Chains Length Organism Details
Dihydrodipicolinate synthase A, B 316 Salmonella enterica EC#: 4.3.3.7 IUBMB
Gene Name(s): dapA STM2489
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 149.82 α = 90.00
b = 56.27 β = 120.36
c = 85.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-28
  • Released Date: 2009-02-10
  • Deposition author(s): Osipiuk, J., Maltseva, N., Stam, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2009-02-10

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance