Macromolecules
Sequence Display for 3F4N

Classification: BIOSYNTHETIC PROTEIN TRANSFERASE

Total Structure Weight: 215102.42

Macromolecule Entities
Molecule Chains Length Organism Details
Pyridoxine 5'-phosphate synthase A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 246 Yersinia pestis EC#: 2.6.99.2 IUBMB
Gene Name(s): pdxJ YPO2930 y1300 YP_2525
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PXP
Query on PXP

A, B, C, D, E, F, G, H PYRIDOXINE-5'-PHOSPHATE
C8 H12 N O6 P
WHOMFKWHIQZTHY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

C, E SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 113.63 α = 90.00
b = 114.82 β = 90.00
c = 154.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-11-01
  • Released Date: 2008-11-25
  • Deposition author(s): Kim, Y., Maltseva, N., Stam, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2008-11-25

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Refinement description, Version format compliance