3ECC

Crystal structure of the DnaC helicase loader in complex with ADP-BeF3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.263

Literature

Macromolecules
Sequence Display for 3ECC

Classification: REPLICATION

Total Structure Weight: 21765.82

Macromolecule Entities
Molecule Chains Length Organism Details
DNA replication protein DnaC A 185 Aquifex aeolicus Gene Name(s): dnaC aq_910
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BEF
Query on BEF

A BERYLLIUM TRIFLUORIDE ION
Be F3
OGIAHMCCNXDTIE-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.263
  • Space Group: P 61

Unit Cell:

Length (Å) Angle (°)
a = 84.58 α = 90.00
b = 84.58 β = 90.00
c = 49.59 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-08-29
  • Released Date: 2008-11-25
  • Deposition author(s): Mott, M.L., Erzberger, J.P., Coons, M.M., Berger, J.

Revision History

  • 2011-07-13
    Type: Version format compliance