3E9A

Crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Vibrio cholerae O1 biovar eltor str. N16961


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.176

Literature

Macromolecules
Sequence Display for 3E9A

Classification: TRANSFERASE

Total Structure Weight: 31180.79

Macromolecule Entities
Molecule Chains Length Organism Details
2-dehydro-3-deoxyphosphooctonate aldolase A 286 Vibrio cholerae EC#: 2.5.1.55 IUBMB
Gene Name(s): kdsA VC0395_A1752 VC395_2289
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 117.19 α = 90.00
b = 117.19 β = 90.00
c = 117.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-08-21
  • Released Date: 2008-09-16
  • Deposition author(s): Nocek, B., Mulligan, R., Kwon, K., Joachimiak, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • Version 1_0: 2008-09-16

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance