3DXC

Crystal structure of the intracellular domain of human APP in complex with Fe65-PTB2

Structural Biology Knowledgebase: 3DXC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 3DXC

Classification: PROTEIN BINDING

Total Structure Weight: 39110.70

Macromolecule Entities
Molecule Chains Length Organism Details
Amyloid beta A4 protein-binding family B member 1 A, C 140 Homo sapiens Fragment: PTB2 domain, UNP residues 534-667
Gene Name(s): APBB1 Gene View FE65 RIR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Amyloid beta A4 protein B, D 35 Homo sapiens Fragment: APP intracellular domain, UNP residues 739-770
Gene Name(s): APP Gene View A4 AD1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.202
  • Space Group: P 61
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 114.32 α = 90.00
b = 114.32 β = 90.00
c = 74.85 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-07-24
  • Released Date: 2008-09-16
  • Deposition author(s): Radzimanowski, J., Sinning, I., Wild, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4