3DOX

X-ray structure of HIV-1 protease in situ product complex

Structural Biology Knowledgebase: 3DOX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3DOX

Classification: HYDROLASE

Total Structure Weight: 22740.83

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 PROTEASE A 203 Human immunodeficiency virus 1 EC#: 3.4.23.16 IUBMB
Mutation: C95M, C1095A
Details: TETHERED DIMER LINKED BY GGSSG
Gene Name(s): gag-pol
A PEPTIDE SUBSTRATE-SQNY P 4 synthetic
A PEPTIDE SUBSTRATE-PIV Q 3 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.197
  • Space Group: P 61
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.38 α = 90.00
b = 62.38 β = 90.00
c = 82.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-07-07
  • Released Date: 2008-09-09
  • Deposition author(s): Hosur, M.V., Ferrer, J.-L., Das, A., Prashar, V., Bihani, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4