3DLO

Structure of universal stress protein from Archaeoglobus fulgidus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.172

Literature

Macromolecules
Sequence Display for 3DLO

Classification: structural genomics unknown function

Total Structure Weight: 69300.97

Macromolecule Entities
Molecule Chains Length Organism Details
Universal stress protein A, B, C, D 155 Archaeoglobus fulgidus Gene Name(s): AF_0826
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

D ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
UNL
Query on UNL

Unknown ligand
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.172
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 43.17 α = 90.00
b = 99.16 β = 92.38
c = 57.39 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-06-27
  • Released Date: 2008-08-26
  • Deposition author(s): Shumilin, I.A., Cymborowski, M., Xu, X., Di Leo, R., Joachimiak, A., Savchenko, A., Edwards, A., Minor, W., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2013-06-26
    Type: Citation | Details: Citation update
  • 2013-04-17
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor