3DLK

Crystal Structure of an engineered form of the HIV-1 Reverse Transcriptase, RT69A

Structural Biology Knowledgebase: 3DLK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.237

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3DLK

Classification: TRANSFERASE

Total Structure Weight: 113575.43

Macromolecule Entities
Molecule Chains Length Organism Details
Reverse transcriptase/ribonuclease H A 556 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB 2.7.7.7 IUBMB
Fragment: p66 (UNP residues 599 to 1153)
Mutation: F160S, C280S
Gene Name(s): gag-pol
p51 RT B 423 Human immunodeficiency virus 1 EC#: 2.7.7.7 IUBMB 3.1.26.4 IUBMB
Fragment: p51 (UNP residues 605 to 1027)
Mutation: C280S
Gene Name(s): gag-pol

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.237
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 164.01 α = 90.00
b = 72.04 β = 104.38
c = 109.33 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-06-27
  • Released Date: 2008-10-07
  • Deposition author(s): Ho, W.C., Bauman, J.D., Himmel, D.M., Das, K., Arnold, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4