Structural basis for translation termination on the 70S ribosome. This file contains the 50S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes as described in remark 400.     DOI:10.2210/pdb3d5d/pdb   NDB ID: RR0226

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Split Entry The asymmetric unit for this structure is composed of multiple PDB entries: 3D5A   3D5B   3D5C   3D5D   Download All Files          Primary Citation       Molecular Description Hide Classification: Ribosome Structure Weight: 1419011.35   Molecule: 50S ribosomal protein L2 Polymer: 1 Type: polypeptide(L) Length: 276 Chains: D Molecule: 50S ribosomal protein L3 Polymer: 2 Type: polypeptide(L) Length: 206 Chains: E Molecule: 50S ribosomal protein L4 Polymer: 3 Type: polypeptide(L) Length: 210 Chains: F Molecule: 50S ribosomal protein L5 Polymer: 4 Type: polypeptide(L) Length: 182 Chains: G Molecule: 50S ribosomal protein L6 Polymer: 5 Type: polypeptide(L) Length: 180 Chains: H Molecule: 50S ribosomal protein L9 Polymer: 6 Type: polypeptide(L) Length: 148 Chains: I Molecule: 50S ribosomal protein L10 Polymer: 7 Type: polypeptide(L) Length: 173 Chains: J Molecule: 50S ribosomal protein L13 Polymer: 8 Type: polypeptide(L) Length: 163 Chains: N Molecule: 50S ribosomal protein L14 Polymer: 9 Type: polypeptide(L) Length: 122 Chains: O Molecule: 50S ribosomal protein L15 Polymer: 10 Type: polypeptide(L) Length: 150 Chains: P Molecule: 50S ribosomal protein L16 Polymer: 11 Type: polypeptide(L) Length: 141 Chains: Q Molecule: 50S ribosomal protein L17 Polymer: 12 Type: polypeptide(L) Length: 118 Chains: R Molecule: 50S ribosomal protein L18 Polymer: 13 Type: polypeptide(L) Length: 112 Chains: S Molecule: 50S ribosomal protein L19 Polymer: 14 Type: polypeptide(L) Length: 146 Chains: T Molecule: 50S ribosomal protein L20 Polymer: 15 Type: polypeptide(L) Length: 118 Chains: U Molecule: 50S ribosomal protein L21 Polymer: 16 Type: polypeptide(L) Length: 101 Chains: V Molecule: 50S ribosomal protein L22 Polymer: 17 Type: polypeptide(L) Length: 113 Chains: W Molecule: 50S ribosomal protein L23 Polymer: 18 Type: polypeptide(L) Length: 96 Chains: X Molecule: 50S ribosomal protein L24 Polymer: 19 Type: polypeptide(L) Length: 110 Chains: Y Molecule: 50S ribosomal protein L25 Polymer: 20 Type: polypeptide(L) Length: 206 Chains: Z Molecule: 50S ribosomal protein L27 Polymer: 21 Type: polypeptide(L) Length: 85 Chains: 0 Molecule: 50S ribosomal protein L28 Polymer: 22 Type: polypeptide(L) Length: 98 Chains: 1 Molecule: 50S ribosomal protein L29 Polymer: 23 Type: polypeptide(L) Length: 72 Chains: 2 Molecule: 50S ribosomal protein L30 Polymer: 24 Type: polypeptide(L) Length: 60 Chains: 3 Molecule: 50S ribosomal protein L31 Polymer: 25 Type: polypeptide(L) Length: 97 Chains: 4 Molecule: 50S ribosomal protein L32 Polymer: 26 Type: polypeptide(L) Length: 60 Chains: 5 Molecule: 50S ribosomal protein L33 Polymer: 27 Type: polypeptide(L) Length: 54 Chains: 6 Molecule: 50S ribosomal protein L34 Polymer: 28 Type: polypeptide(L) Length: 49 Chains: 7 Molecule: 50S ribosomal protein L35 Polymer: 29 Type: polypeptide(L) Length: 65 Chains: 8 Molecule: 23S RRNA Polymer: 30 Type: polyribonucleotide Length: 2894 Chains: A Molecule: 5S RRNA Polymer: 31 Type: polyribonucleotide Length: 124 Chains: B       Source Hide Polymer: 1 Scientific Name: Thermus thermophilus hb27   Polymer: 2 Scientific Name: Thermus thermophilus hb27   Polymer: 3 Scientific Name: Thermus thermophilus hb27   Polymer: 4 Scientific Name: Thermus thermophilus hb27   Polymer: 5 Scientific Name: Thermus thermophilus hb27   Polymer: 6 Scientific Name: Thermus thermophilus hb27   Polymer: 7 Scientific Name: Thermus thermophilus hb27   Polymer: 8 Scientific Name: Thermus thermophilus hb27   Polymer: 9 Scientific Name: Thermus thermophilus hb27   Polymer: 10 Scientific Name: Thermus thermophilus hb27   Polymer: 11 Scientific Name: Thermus thermophilus hb27   Polymer: 12 Scientific Name: Thermus thermophilus hb27   Polymer: 13 Scientific Name: Thermus thermophilus hb27   Polymer: 14 Scientific Name: Thermus thermophilus hb27   Polymer: 15 Scientific Name: Thermus thermophilus hb27   Polymer: 16 Scientific Name: Thermus thermophilus hb27   Polymer: 17 Scientific Name: Thermus thermophilus hb27   Polymer: 18 Scientific Name: Thermus thermophilus hb27   Polymer: 19 Scientific Name: Thermus thermophilus hb27   Polymer: 20 Scientific Name: Thermus thermophilus hb27   Polymer: 21 Scientific Name: Thermus thermophilus hb27   Polymer: 22 Scientific Name: Thermus thermophilus hb27   Polymer: 23 Scientific Name: Thermus thermophilus hb27   Polymer: 24 Scientific Name: Thermus thermophilus hb27   Polymer: 25 Scientific Name: Thermus thermophilus hb27   Polymer: 26 Scientific Name: Thermus thermophilus hb27   Polymer: 27 Scientific Name: Thermus thermophilus hb27   Polymer: 28 Scientific Name: Thermus thermophilus hb27   Polymer: 29 Scientific Name: Thermus thermophilus hb27   Polymer: 30 Scientific Name: Thermus thermophilus hb27   Polymer: 31 Scientific Name: Thermus thermophilus hb27         Related PDB Entries Hide Id Details 3D5A  30S SUBUNIT OF 70S RIBOSOME ONE  3D5B  50S SUBUNIT OF 70S RIBOSOME ONE  3D5C  30S SUBUNIT OF 70S RIBOSOME TWO        Ligand Chemical Component Hide Identifier Name Formula Interaction View Links MG     MAGNESIUM ION Mg Ligand Explorer       Derived Data Hide SCOP Classification v1.75 - (12 Domains) PFAM Classification - (29 Domains) GO Terms - (190 Terms)     Reset Layout

Biological Assembly 1     More Images... View in Jmol Composite of PDB entries (3D5A and 3D5B)         Deposition Summary Hide Authors:   Laurberg, M.,   Asahara, H.,   Korostelev, A.,   Zhu, J.,   Trakhanov, S.,   Noller, H.F. Deposition:   2008-05-16 Release:   2008-10-07 Last Modified (REVDAT):   2009-02-24       Experimental Details Hide Method:   X-RAY DIFFRACTION Experimental Data:   Resolution[Å]: 3.21 R-Value: 0.292 (obs.) R-Free: 0.319 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 210.13 α = 90.00  b = 454.39 β = 90.00  c = 616.45 γ = 90.00        Structure Links Hide Molecule of the Month Features: 70S Ribosomes