3D3Q

Crystal structure of tRNA delta(2)-isopentenylpyrophosphate transferase (SE0981) from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR100


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.231

Literature

Macromolecules
Sequence Display for 3D3Q

Classification: TRANSFERASE

Total Structure Weight: 80726.44

Macromolecule Entities
Molecule Chains Length Organism Details
tRNA delta(2)-isopentenylpyrophosphate transferase A, B 340 Staphylococcus epidermidis EC#: 2.5.1.75 IUBMB
Gene Name(s): miaA SE_0981
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.231
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 58.62 α = 90.00
b = 84.48 β = 102.87
c = 75.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-05-12
  • Released Date: 2008-07-15
  • Deposition author(s): Forouhar, F., Abashidze, M., Seetharaman, J., Mao, L., Xiao, R., Maglaqui, M., Lee, D., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Revision History

  • 2011-07-13
    Type: Version format compliance