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Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator
DOI:10.2210/pdb3clc/pdb   NDB ID: PD1095
3CLC
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription Regulator/dna
    Structure Weight: 59664.71
    Molecule: Regulatory protein
    Polymer: 1 Type: protein Length: 82
    Chains: A, B, C, D
    Organism: Enterobacter sp. RFL1396
    Gene Name: esp1396IC
    UniProtKB: Protein Feature View | Search PDB | Q8GGH0  
    Molecule: 35-MER
    Polymer: 2 Type: dna Length: 35
    Chains: E
    Details: Operator DNA
    Molecule: 35-MER
    Polymer: 3 Type: dna Length: 35
    Chains: F
    Details: Operator DNA
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Enterobacter sp.   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD1095
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   McGeehan, J.E.,  Streeter, S.D.,  Thresh, S.J.,  Ball, N.,  Ravelli, R.B.,  Kneale, G.G.

    Deposition:   2008-03-18
    Release:   2008-07-29
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Flag residual B-value
    2011-07-13
    Source and taxonomy
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.80
    R-Value: 0.209 (obs.)
    R-Free: 0.239
    Space Group: P 65
    Unit Cell:
      Length [Å] Angles [°]
    a = 104.48 α = 90.00 
    b = 104.48 β = 90.00 
    c = 139.29 γ = 120.00