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Complex of Dictyostelium discoideum Actin with Profilin and the Last Poly-Pro of Human VASP
3CHW
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Structural Protein
    Structure Weight: 58502.69
    Molecule: Major actin
    Polymer: 1 Type: protein Length: 375
    Chains: A
    Organism: Dictyostelium discoideum
    Gene Names: act1 act1a DDB_G0289553 act2 act2-1 DDB_G0274133 act4 DDB_G0289005 act5 DDB_G0289663 act6 DDB_G0274135 act7 DDB_G0280545 act8 actA8 DDB_G0269234 act9 DDB_G0274601 act11 DDB_G0288879 act12 DDB_G0274129 act13 DDB_G0274599 act14 actB1 DDB_G0274137 act15 actA1 DDB_G0272520 act16 actM6 DDB_G0272248 act19 DDB_G0274727 act20 DDB_G0274285 act21 DDB_G0274561
    UniProtKB: Protein Feature View | Search PDB | P07830  
    Molecule: Profilin-1
    Polymer: 2 Type: protein Length: 139
    Chains: P
    Organism: Homo sapiens
    Gene Name: Gene View for PFN1
    UniProtKB: Protein Feature View | Search PDB | P07737  
    Molecule: Vasodilator-stimulated phosphoprotein 16-residue peptide
    Polymer: 3 Type: protein Length: 16
    Chains: V
    Fragment: Last Poly-Pro Repeat
    Organism: Homo sapiens
    Gene Name: Gene View for VASP
    UniProtKB: Protein Feature View | Search PDB | P50552  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Dictyostelium discoideum   Taxonomy   Common Name: Slime mold  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    2CI5   
    2CIP   
    2PAV  Model structure for molecular replacement. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ATP
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    ATP C10 H16 N5 O13 P3
    ADENOSINE-5'-TRIPHOSPHATE
    ATP:3CHW
    CA
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    CA Ca
    CALCIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    HIC
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    HIC C7 H11 N3 O2 HIS lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Baek, K.,  Dominguez, R.

    Deposition:   2008-03-10
    Release:   2008-08-19
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Flag residual B-value
    2011-07-13
    Refinement description
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.30
    R-Value: 0.161 (obs.)
    R-Free: 0.227
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 38.04 α = 90.00 
    b = 76.18 β = 90.00 
    c = 180.82 γ = 90.00