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RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND MANGANESE IONS (POST-REACTIVE COMPLEX)
DOI:10.2210/pdb3bam/pdb   NDB ID: PD0031
3BAM
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/dna
    Structure Weight: 56592.82
    Molecule: DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3')
    Polymer: 1 Type: dna Length: 12
    Chains: C
    Molecule: DNA (5'-D(*TP*AP*TP*G)-3')
    Polymer: 2 Type: dna Length: 4
    Chains: D
    Molecule: DNA (5'-D(P*GP*AP*TP*CP*CP*AP*TP*A)-3')
    Polymer: 3 Type: dna Length: 8
    Chains: E
    Molecule: PROTEIN (RESTRICTION ENDONUCLEASE BAMHI)
    Polymer: 4 Type: protein Length: 213
    Chains: A, B
    EC#: 3.1.21.4   
    Details: CRYSTAL GROWN IN THE PRESENCE OF MANGANESE IONS.
    Organism: Bacillus amyloliquefaciens
    Gene Name: bamHIR
    UniProtKB: Protein Feature View | Search PDB | P23940  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 4
    Scientific Name: Bacillus amyloliquefaciens   Taxonomy   Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MN
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    MN Mn
    MANGANESE (II) ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0031
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Viadiu, H.,  Aggarwal, A.K.

    Deposition:   1998-08-19
    Release:   1999-01-13
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   1.80
    R-Value: 0.226 (obs.)
    R-Free: 0.268
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 106.40 α = 90.00 
    b = 79.60 β = 90.00 
    c = 67.60 γ = 90.00