3B39

Structure of the DnaG primase catalytic domain bound to ssDNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 3B39

Classification: transferase / DNA

Total Structure Weight: 81788.02


Macromolecule Entities
Molecule Chains Length Organism Details
DNA primase A, B 322 Escherichia coli EC#: 2.7.7 IUBMB
Fragment: RNA Polymerase Domain
Mutation: R320C
Gene Name(s): dnaG dnaP parB b3066 JW3038
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*DCP*DAP*DAP*DAP*DGP*DCP*DCP*DAP*DAP*DAP*DAP*DGP*DGP*DAP*DC)-3') C, D 15 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.212
  • Space Group: P 62

Unit Cell:

Length (Å) Angle (°)
a = 136.83 α = 90.00
b = 136.83 β = 90.00
c = 71.07 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-10-19
  • Released Date: 2008-01-15
  • Deposition author(s): Corn, J.E., Pelton, J.G., Berger, J.M.

Revision History

  • Version 1_0: 2008-01-15

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Source and taxonomy, Version format compliance