3AGY

Crystal structure of human Hsp40 Hdj1 peptide-binding domain complexed with a C-terminal peptide of Hsp70

Structural Biology Knowledgebase: 3AGY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.225

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3AGY

Classification: CHAPERONE

Total Structure Weight: 43540.82

Macromolecule Entities
Molecule Chains Length Organism Details
DnaJ homolog subfamily B member 1 A, B 181 Homo sapiens Fragment: UNP residues 161-340
Gene Name(s): DNAJB1 Gene View DNAJ1 HDJ1 HSPF1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
peptide of Heat shock cognate 71 kDa protein C, D, F 8 Homo sapiens Fragment: UNP residues 639-646
Gene Name(s): HSPA8 Gene View HSC70 HSP73 HSPA10
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.225
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 104.75 α = 90.00
b = 41.13 β = 97.42
c = 62.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-04-12
  • Released Date: 2011-02-23
  • Deposition author(s): Suzuki, H., Noguchi, S., Satow, Y.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4