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STRUCTURAL BASIS FOR G C RECOGNITION IN THE DNA MINOR GROOVE
 
 
DOI:10.2210/pdb365d/pdb   NDB ID: GDJ057
365D
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: DNA
    Structure Weight: 7549.28
     
    Molecule:DNA (5'-D(*CP*CP*AP*GP*GP*(CBR)P*CP*TP*GP*G)-3')
    Polymer:1Type:polydeoxyribonucleotideLength:10
    Chains:A, B
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    IIP     IMIDAZOLE-PYRROLE POLYAMIDE C30 H41 N12 O5 3DLigand Explorer Link out to Ligand Expos:IIP Link out to SuperLigands:IIP Link out to SuperHapten:IIP
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    CBR 5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE (parent: DC)(type: dnaLinking) C9 H13 Br N3 O7 P Link out to Ligand Expos:CBR Link out to SuperLigands:CBR Link out to SuperHapten:CBR 2D
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Kielkopf, C.L.,   Baird, E.E.,   Dervan, P.B.,   Rees, D.C.

    Deposition:   1997-12-17
    Release:   1998-02-05
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 2.00
    R-Value: 0.222 (obs.)
    R-Free: 0.260
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 34.40 α = 90.00 
    b = 38.96 β = 90.00 
    c = 44.42 γ = 90.00