2ZKY

Crystal structure of human Cu-Zn superoxide dismutase mutant G93A

Structural Biology Knowledgebase: 2ZKY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2ZKY

Classification: OXIDOREDUCTASE

Total Structure Weight: 164497.39

Macromolecule Entities
Molecule Chains Length Organism Details
Superoxide dismutase [Cu-Zn] A, B, C..., D, E, F, G, H, I, JA, B, C, D, E, F, G, H, I, J 159 Homo sapiens EC#: 1.15.1.1 IUBMB
Mutation: G93A
Gene Name(s): SOD1 Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D, E, F, G, H, I, J ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.189
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 165.24 α = 90.00
b = 204.51 β = 90.00
c = 144.82 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-03-31
  • Released Date: 2009-03-24
  • Deposition author(s): Yoshikawa, S., Kukimoto-Niino, M., Ito, K., Shirouzu, M., Urushitani, M., Takahashi, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
  • Previous versions: 2YQX

Revision History

  • 2012-04-04
    Type: Other | Details: add SPRSDE
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4