2Y04

TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND PARTIAL AGONIST SALBUTAMOL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.223

Literature

Macromolecules
Sequence Display for 2Y04

Classification: RECEPTOR

Total Structure Weight: 78124.96

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-1 ADRENERGIC RECEPTOR A, B 315 Meleagris gallopavo Fragment: RESIDUES 33-368
Mutation: R68S, M90V, C116L, Y227A, ΔC244, ΔE245, ΔG246, ΔR247, ΔF248, ΔY249, ΔG250, ΔS251, ΔQ252, ΔE253, ΔQ254, ΔP255, ΔQ256, ΔP257, ΔP258, ΔP259, ΔL260, ΔP261, ΔQ262, ΔH263, ΔQ264, ΔP265, ΔI266, ΔL267, ΔG268, ΔN269, ΔG270, ΔR271, A282L, F327A, F338M, C358A
Details: RESIDUES 3-32 AT THE N-TERMINUS AND RESIDUES 244-271 OF THE THIRD INTRACELLULAR LOOP WERE DELETED FROM THE CONSTRUCT. THE CONSTRUCT WAS TRUNCATED AFTER RESIDUE 367 AND A HEXAHIS TAG ADDED.
Gene Name(s): ADRB1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: G Protein-Coupled Receptors (GPCRs)

Protein Name: β1 adrenergic receptor (engineered)


Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
Y01
Query on Y01

A, B CHOLESTEROL HEMISUCCINATE
C31 H50 O4
WLNARFZDISHUGS-MIXBDBMTSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
2CV
Query on 2CV

A, B HEGA-10
C18 H37 N O7
ITEIKACYSCODFV-ATLSCFEFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
68H
Query on 68H

A, B SALBUTAMOL
C13 H21 N O3
NDAUXUAQIAJITI-LBPRGKRZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.223
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 89.90 α = 90.00
b = 62.00 β = 109.90
c = 101.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-30
  • Released Date: 2011-01-12
  • Deposition author(s): Warne, A., Moukhametzianov, R., Baker, J.G., Nehme, R., Edwards, P.C., Leslie, A.G.W., Schertler, G.F.X., Tate, C.G.

Revision History

  • Version 1_0: 2011-01-12

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance