2X19

CRYSTAL STRUCTURE OF IMPORTIN13 - RANGTP COMPLEX

Structural Biology Knowledgebase: 2X19 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.236

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2X19

Classification: NUCLEAR TRANSPORT

Total Structure Weight: 129695.80

Macromolecule Entities
Molecule Chains Length Organism Details
GTP-BINDING NUCLEAR PROTEIN GSP1/CNR1 A 172 Saccharomyces cerevisiae Fragment: RESIDUES 8-179
Mutation: Q71L
Gene Name(s): GSP1 CNR1 Gene View CST17 YLR293C L8003.19
IMPORTIN-13 B 963 Homo sapiens Gene Name(s): IPO13 Gene View KIAA0724 RANBP13

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GTP
Query on GTP

A GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.236
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 99.93 α = 90.00
b = 99.93 β = 90.00
c = 276.84 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-12-23
  • Released Date: 2010-02-16
  • Deposition author(s): Bono, F., Cook, A.G., Gruenwald, M., Ebert, J., Conti, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4