Macromolecules
Sequence Display for 2VXO

Classification: LIGASE

Total Structure Weight: 156447.02

Macromolecule Entities
Molecule Chains Length Organism Details
GMP SYNTHASE [GLUTAMINE-HYDROLYZING] A, B 697 Homo sapiens EC#: 6.3.5.2 IUBMB
Fragment: RESIDUES 20-693
Gene Name(s): GMPS Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XMP
Query on XMP

A, B XANTHOSINE-5'-MONOPHOSPHATE
5-MONOPHOSPHATE-9-BETA-D-RIBOFURANOSYL XANTHINE (Synonym)
C10 H14 N4 O9 P
DCTLYFZHFGENCW-UUOKFMHZSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.203
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 98.52 α = 90.00
b = 123.42 β = 90.00
c = 127.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-07-08
  • Released Date: 2008-08-12
  • Deposition author(s): Welin, M., Lehtio, L., Andersson, J., Arrowsmith, C.H., Berglund, H., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Karlberg, T., Kotenyova, T., Moche, M., Nilsson, M.E., Nyman, T., Olesen, K., Persson, C., Sagemark, J., Schueler, H., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Wisniewska, M., Wikstrom, M., Nordlund, P.

Revision History

  • Version 1_0: 2008-08-12

    Type: Initial release

  • Version 1_1: 2013-07-10

    Type: Database references, Derived calculations, Non-polymer description, Other, Source and taxonomy, Structure summary, Version format compliance

  • Version 1_2: 2013-11-13

    Type: Database references