2VU1

BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF WITH O-PANTHETEINE-11-PIVALATE.

Structural Biology Knowledgebase: 2VU1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.215

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2VU1

Classification: TRANSFERASE

Total Structure Weight: 163426.13

Macromolecule Entities
Molecule Chains Length Organism Details
ACETYL-COA ACETYLTRANSFERASE A, B, C, D 392 Zoogloea ramigera EC#: 2.3.1.9 IUBMB
Fragment: RESIDUES 2-392
Mutation: A129R
Gene Name(s): phbA

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OPI
Query on OPI

A, B PANTOTHENYL-AMINOETHANOL-11-PIVALIC ACID
C16 H30 N2 O6
BUEKNBNKVUKNIB-LBPRGKRZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSO
Query on CSO
A, B, C, D L-PEPTIDE LINKING C3 H7 N O3 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.215
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 84.30 α = 90.00
b = 78.74 β = 92.93
c = 148.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-05-19
  • Released Date: 2008-10-28
  • Deposition author(s): Kursula, P., Schmitz, W., Wierenga, R.K.

Revision History

  • 2011-07-13
    Type: Refinement description | Details: Fixed TLS group
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4