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GUANOSINE N7 METHYL-TRANSFERASE SUB-COMPLEX (D1-D12) OF THE VACCINIA VIRUS MRNA CAPPING ENZYME
 
 
DOI:10.2210/pdb2vdw/pdb
2VDW
 
Primary Citation
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  •  
    Move Section Molecular Description Hide
    Classification: Transferase
    Structure Weight: 275225.07
     
    Molecule:VACCINIA VIRUS CAPPING ENZYME D1 SUBUNIT
    Polymer:1Type:polypeptide(L)Length:302
    Chains:A, C, E, G
    EC#:2.7.7.50 Go to IUBMB EC entry  
    Fragment:C-TERMINAL METHYL-TRANSFERASE DOMAIN, RESIDUES 545-844
    Other Details:ADDITIONAL GLY-ALA PRECEDING ASP545 OF D1
    Molecule:MRNA-CAPPING ENZYME SMALL SUBUNIT
    Polymer:2Type:polypeptide(L)Length:287
    Chains:B, D, F, H
    EC#:2.1.1.56 Go to IUBMB EC entry  
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Vaccinia virus Go to NCBI Taxonomy entry Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Vaccinia virus Go to NCBI Taxonomy entry Expression System: Escherichia coli  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    SAH     S-ADENOSYL-L-HOMOCYSTEINE C14 H20 N6 O5 S 3DLigand Explorer Link out to Ligand Expos:SAH Link out to SuperLigands:SAH Link out to SuperHapten:SAH
    SO4     SULFATE ION O4 S 3DLigand Explorer Link out to Ligand Expos:SO4 Link out to SuperLigands:SO4 Link out to SuperHapten:SO4
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    SAH S-ADENOSYL-L-HOMOCYSTEINE (parent: CYS)(type: lPeptideLinking) C14 H20 N6 O5 S 3D Ligand Explorer Link out to Ligand Expos:SAH Link out to SuperLigands:SAH Link out to SuperHapten:SAH 2D
     
     
  •  
    Move Section Derived Data Hide
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 generated by PQS (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   De La Pena, M.,   Kyrieleis, O.J.P.,   Cusack, S.

    Deposition:   2007-10-12
    Release:   2008-05-13
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 2.70
    R-Value: 0.225 (obs.)
    R-Free: 0.265
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 60.89 α = 94.22 
    b = 61.02 β = 92.95 
    c = 225.78 γ = 108.26