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Crystal structure of the VEGFR2 kinase domain in complex with a nicotinamide inhibitor
 
 
DOI:10.2210/pdb2p2i/pdb
2P2I
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Transferase
    Structure Weight: 73358.69
     
    Molecule:Vascular endothelial growth factor receptor 2
    Polymer:1Type:polypeptide(L)Length:314
    Chains:A, B
    EC#:2.7.10.1 Go to IUBMB EC entry  
    Fragment:kinase domain
    Mutation:C817A, E990V, (delete 940-989)
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens Go to NCBI Taxonomy entry Common Name: Human Expression System: Trichoplusia ni  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    2P2H   
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    608     N-(4-phenoxyphenyl)-2-[(pyridin-4-ylmethyl)amino]nicotinamide C24 H20 N4 O2 3DLigand Explorer Link out to Ligand Expos:608 Link out to SuperLigands:608 Link out to SuperHapten:608
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    PTR O-PHOSPHOTYROSINE (parent: TYR)(type: lPeptideLinking) C9 H12 N O6 P 3D Ligand Explorer Link out to Ligand Expos:PTR Link out to SuperLigands:PTR Link out to SuperHapten:PTR 2D
     
     
  •  
    Move Section Derived Data Hide
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Whittington, D.A.,   Kim, J.L.,   Long, A.M.,   Rose, P.,   Gu, Y.,   Zhao, H.

    Deposition:   2007-03-07
    Release:   2007-03-20
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 2.40
    R-Value: 0.222 (work)
    R-Free: 0.266
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 55.42 α = 90.00 
    b = 67.06 β = 94.51 
    c = 88.51 γ = 90.00