The structure of putative TolB from Agrobacterium tumefaciens
Cuff, M.E., Xu, X., Gu, J., Edwards, A., Savchenko, A., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uncharacterized protein Atu1656/AGR_C_3050 | 297 | Agrobacterium fabrum str. C58 | Mutation(s): 9  Gene Names: tolB | ||
UniProt | |||||
Find proteins for Q8UEU8 (Agrobacterium fabrum (strain C58 / ATCC 33970)) Explore Q8UEU8  Go to UniProtKB:  Q8UEU8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8UEU8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ACY Query on ACY | B [auth A], C [auth A] | ACETIC ACID C2 H4 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 144.714 | α = 90 |
b = 56.159 | β = 107.95 |
c = 48.332 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
SBC-Collect | data collection |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
HKL-3000 | phasing |
SHELXD | phasing |
SHELXE | model building |
MLPHARE | phasing |
DM | phasing |
SOLVE | phasing |
RESOLVE | phasing |
ARP/wARP | model building |
CCP4 | phasing |
O | model building |
Coot | model building |