2OG8

crystal structure of aminoquinazoline 36 bound to Lck

Structural Biology Knowledgebase: 2OG8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.247

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2OG8

Classification: TRANSFERASE

Total Structure Weight: 62163.62

Macromolecule Entities
Molecule Chains Length Organism Details
Proto-oncogene tyrosine-protein kinase LCK A, B 265 Homo sapiens EC#: 2.7.10.2 IUBMB
Fragment: Lck kinase domain, residues 236-498
Gene Name(s): LCK Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1N8
Query on 1N8

A, B N-{2-[(N,N-DIETHYLGLYCYL)AMINO]-5-(TRIFLUOROMETHYL)PHENYL}- 4-METHYL-3-[2-(METHYLAMINO)QUINAZOLIN-6-YL]BENZAMIDE
AMINOQUINAZOLINE 36 (Synonym)
C30 H31 F3 N6 O2
YGLITMMDQOZAHY-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
1N8 IC50: 0.5 nM (100) BindingDB

IC50: 0.5 nM  BindingMOAD
IC50: 0.5 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.247
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 62.69 α = 90.00
b = 80.07 β = 90.00
c = 132.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-01-05
  • Released Date: 2007-02-27
  • Deposition author(s): Huang, X.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4