2OA5

Crystal structure of ORF52 from Murid herpesvirus (MUHV-4) (Murine gammaherpesvirus 68) at 2.1 A resolution. Northeast Structural Genomics Consortium target MHR28B.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 2OA5

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 25832.56

Macromolecule Entities
Molecule Chains Length Organism Details
Hypothetical protein BQLF2 A, B 110 Murid gammaherpesvirus 4 Fragment: residues 1-102
Mutation: M1M, M13M, M65M, M100M
Gene Name(s): BQLF2 52 GAMMAHV.ORF52
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PE5
Query on PE5

A, B 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
POLYETHYLENE GLYCOL PEG400, (Synonym)
C18 H38 O9
CUDPPTPIUWYGFI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.215
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 93.46 α = 90.00
b = 49.39 β = 111.88
c = 56.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-12-14
  • Released Date: 2007-01-30
  • Deposition author(s): Benach, J., Chen, Y., Seetharaman, J., Janjua, H., Xiao, R., Cunningham, K., Ma, L.-C., Ho, C.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

Revision History

  • Version 1_0: 2007-01-30

    Type: Initial release

  • Version 1_1: 2007-09-17

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Derived calculations, Version format compliance

  • Version 1_3: 2017-10-18

    Type: Refinement description

  • Version 1_4: 2017-10-25

    Type: Author supporting evidence