2O25

Ubiquitin-Conjugating Enzyme E2-25 kDa Complexed With SUMO-1-Conjugating Enzyme UBC9

Structural Biology Knowledgebase: 2O25 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.228

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2O25

Classification: LIGASE

Total Structure Weight: 81499.99

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin-conjugating enzyme E2-25 kDa A, B 202 Homo sapiens EC#: 2.3.2.23 IUBMB
Gene Name(s): UBE2K Gene View HIP2 LIG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
SUMO-1-conjugating enzyme UBC9 C, D 160 Homo sapiens Gene Name(s): UBE2I Gene View UBC9 UBCE9
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.228
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.87 α = 85.05
b = 68.50 β = 80.85
c = 91.28 γ = 75.83

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-11-29
  • Released Date: 2007-01-16
  • Deposition author(s): Walker, J.R., Avvakumov, G.V., Xue, S., Newman, E.M., Mackenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor