2O1M

Crystal structure of the probable amino-acid ABC transporter extracellular-binding protein ytmK from Bacillus subtilis. Northeast Structural Genomics Consortium target SR572


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 2O1M

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 59179.36

Macromolecule Entities
Molecule Chains Length Organism Details
Probable amino-acid ABC transporter extracellular-binding protein ytmK A, B 258 Bacillus subtilis Mutation: M63M, M84M, M208M
Gene Name(s): tcyK ytmK BSU29370
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.230
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 81.56 α = 90.00
b = 88.93 β = 90.00
c = 76.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-11-29
  • Released Date: 2006-12-19
  • Deposition author(s): Kuzin, A.P., Su, M., Seetharaman, J., Chen, C.X., Fang, Y., Cunningham, K., Ma, L.C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance