2NLL

RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 2NLL

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 31357.99


Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (RETINOIC ACID RECEPTOR) A 66 Homo sapiens Gene Name(s): RXRA Gene View NR2B1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (THYROID HORMONE RECEPTOR) B 103 Homo sapiens Mutation: Q401E
Gene Name(s): THRB Gene View ERBA2 NR1A2 THR1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*AP*GP*GP*TP*CP*AP*TP*TP*(5IU)P*CP*AP*GP*GP*TP*CP*AP*G)-3') C 18 synthetic
DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*GP*AP*AP*AP*TP*GP*AP*CP*CP*T P*G)-3') D 18 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
5IU
Query on 5IU
C DNA LINKING C9 H12 I N2 O8 P DU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.206
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 40.90 α = 90.00
b = 65.60 β = 90.00
c = 125.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-11-20
  • Released Date: 1997-03-12
  • Deposition author(s): Rastinejad, F., Perlmann, T., Evans, R.M., Sigler, P.B.

Revision History

  • 2008-05-22
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance