2IYZ

Shikimate kinase from Mycobacterium tuberculosis in complex with shikimate-3-phosphate and ADP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 2IYZ

Classification: TRANSFERASE

Total Structure Weight: 20364.84

Macromolecule Entities
Molecule Chains Length Organism Details
SHIKIMATE KINASE A 184 Mycobacterium tuberculosis EC#: 2.7.1.71 IUBMB
Gene Name(s): aroK Rv2539c MTCY159.17
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
S3P
Query on S3P

A SHIKIMATE-3-PHOSPHATE
C7 H11 O8 P
QYOJSKGCWNAKGW-PBXRRBTRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.191
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 59.61 α = 90.00
b = 59.61 β = 90.00
c = 102.91 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-07-22
  • Released Date: 2006-10-11
  • Deposition author(s): Hartmann, M.D., Bourenkov, G.P., Oberschall, A., Strizhov, N., Bartunik, H.D.

Revision History

  • Version 1_0: 2006-10-11

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance