2IW1

Crystal Structure of WaaG, a glycosyltransferase involved in lipopolysaccharide biosynthesis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.187

Literature

Macromolecules
Sequence Display for 2IW1

Classification: TRANSFERASE

Total Structure Weight: 42908.34

Macromolecule Entities
Molecule Chains Length Organism Details
LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS PROTEIN RFAG A 374 Escherichia coli EC#: 2.4 IUBMB
Gene Name(s): rfaG pcsA waaG b3631 JW3606
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
U2F
Query on U2F

A URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA- D-GLUCOSE
C15 H23 F N2 O16 P2
NGTCPFGWXMBZEP-NQQHDEILSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.187
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 50.72 α = 90.00
b = 88.35 β = 90.00
c = 89.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-06-23
  • Released Date: 2006-10-11
  • Deposition author(s): Martinez-Fleites, C., Proctor, M., Roberts, S., Bolam, D.N., Gilbert, H.J., Davies, G.J.

Revision History

  • Version 1_0: 2006-10-11

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance