2HZN

Abl kinase domain in complex with NVP-AFG210

Structural Biology Knowledgebase: 2HZN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.314
  • R-Value Work: 0.264

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2HZN

Classification: TRANSFERASE

Total Structure Weight: 34117.09

Macromolecule Entities
Molecule Chains Length Organism Details
Proto-oncogene tyrosine-protein kinase ABL1 A 293 Mus musculus EC#: 2.7.10.2 IUBMB
Gene Name(s): Abl1 Abl

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
KIN
Query on KIN

A 1-[4-(PYRIDIN-4-YLOXY)PHENYL]-3-[3-(TRIFLUOROMETHYL)PHENYL]UREA
C19 H14 F3 N3 O2
DDDLGNOZDKDSEG-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
KIN N/A in BindingDB
N/A in BindingMoad
IC50: 41 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.314
  • R-Value Work: 0.264
  • Space Group: I 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 105.43 α = 90.00
b = 105.43 β = 90.00
c = 110.36 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-08-09
  • Released Date: 2007-01-16
  • Deposition author(s): Cowan-Jacob, S.W., Fendrich, G., Liebetanz, J., Fabbro, D., Manley, P.

Revision History

  • 2011-07-27
    Type: Version format compliance | Details: --
  • 2011-07-27
    Type: Refinement description | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4