2HVN

Human Aldose Reductase-zopolrestat complex obtained by cocrystallisation after one day (1day_cocryst)

Structural Biology Knowledgebase: 2HVN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.58 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.163

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2HVN

Classification: OXIDOREDUCTASE

Total Structure Weight: 37061.44

Macromolecule Entities
Molecule Chains Length Organism Details
Aldose reductase A 316 Homo sapiens EC#: 1.1.1.21 IUBMB
Mutation: L4I
Gene Name(s): AKR1B1 Gene View ALDR1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAP
Query on NAP

A NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE (Synonym)
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZST
Query on ZST

A 3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2- BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID
C19 H12 F3 N3 O3 S
BCSVCWVQNOXFGL-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
ZST IC50: 3.1 - 81 nM (85 - 99) BindingDB
Ki: 19 nM (99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.58 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.163
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 49.39 α = 90.00
b = 66.93 β = 93.00
c = 47.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-07-29
  • Released Date: 2006-10-03
  • Deposition author(s): Steuber, H., Heine, A., Klebe, G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4