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Structure of the West Nile Virus envelope glycoprotein
 
 
DOI:10.2210/pdb2hg0/pdb
2HG0
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Viral Protein
    Structure Weight: 44816.05
     
    Molecule:Envelope glycoprotein
    Polymer:1Type:polypeptide(L)Length:408
    Chains:A
    Fragment:Ectodomain (residues 291-692)
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: West nile virus Go to NCBI Taxonomy entry Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1OAN  DENV-2 E protein 
    1OKE  DENV-2 E protein 
    1SVB  Tick borne encephalitis E protein 
    1TG8  DENV-2 E protein 
    1UZG  DENV-3 E protein 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    FUL     BETA-L-FUCOSE C6 H12 O5 3DLigand Explorer Link out to Ligand Expos:FUL Link out to SuperLigands:FUL Link out to SuperHapten:FUL
    NDG     2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE C8 H15 N O6 3DLigand Explorer Link out to Ligand Expos:NDG Link out to SuperLigands:NDG Link out to SuperHapten:NDG
     
     
  •  
    Move Section Derived Data Hide
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Nybakken, G.E.,   Nelson, C.A.,   Chen, B.R.,   Diamond, M.S.,   Fremont, D.H.

    Deposition:   2006-06-26
    Release:   2006-11-07
    Last Modified (REVDAT):   2009-12-01
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 3.00
    R-Value: 0.264 (obs.)
    R-Free: 0.307
    Space Group: P 41 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 89.60 α = 90.00 
    b = 89.60 β = 90.00 
    c = 154.04 γ = 90.00