2GK3

Cytoplasmic Protein STM3548 from Salmonella typhimurium

Structural Biology Knowledgebase: 2GK3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.177

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2GK3

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 175945.16

Macromolecule Entities
Molecule Chains Length Organism Details
putative cytoplasmic protein A, B, C..., D, E, FA, B, C, D, E, F 256 Salmonella enterica Mutation: M1M, M21M, M56M, M120M, M128M, M149M, M221M, M234M
Gene Name(s): STM3548

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B, C, D, E, F GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.177
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 182.89 α = 90.00
b = 79.37 β = 90.00
c = 115.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-03-31
  • Released Date: 2006-05-02
  • Deposition author(s): Petrova, T., Cuff, M.E., Wu, R.Y., Holzle, D., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-08-03
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4