Macromolecules
Sequence Display for 2FPO

Classification: TRANSFERASE

Total Structure Weight: 133365.36

Macromolecule Entities
Molecule Chains Length Organism Details
methylase yhhF A, B, C..., D, E, FA, B, C, D, E, F 202 Escherichia coli EC#: 2.1.1 IUBMB
Mutation: M1M, M83M, M111M
Gene Name(s): rsmD yhhF b3465 JW3430
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, C, D, E, F CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.183
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 70.50 α = 90.00
b = 96.91 β = 92.21
c = 193.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-01-16
  • Released Date: 2006-02-28
  • Deposition author(s): Osipiuk, J., Kim, Y., Sanishvili, R., Skarina, T., Evdokimova, E., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor