2FAP

THE STRUCTURE OF THE IMMUNOPHILIN-IMMUNOSUPPRESSANT FKBP12-(C16)-ETHOXY RAPAMYCIN COMPLEX INTERACTING WITH HUMA

Structural Biology Knowledgebase: 2FAP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2FAP

Classification: COMPLEX (ISOMERASE / KINASE)

Total Structure Weight: 24096.81

Macromolecule Entities
Molecule Chains Length Organism Details
FK506-BINDING PROTEIN A 107 Homo sapiens EC#: 5.2.1.8 IUBMB
Gene Name(s): FKBP1A Gene View FKBP1 FKBP12
FRAP B 94 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: FRB
Gene Name(s): MTOR Gene View FRAP FRAP1 FRAP2 RAFT1 RAPT1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RAD
Query on RAD

A C49-METHYL RAPAMYCIN
C52 H81 N O13
GPZGXSFHPLUMHE-JQEUAWNDSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
RAD EC50: 200 nM (100) BindingDB
Ki: 4 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.196
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 44.63 α = 90.00
b = 52.14 β = 90.00
c = 102.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-09-22
  • Released Date: 1999-05-18
  • Deposition author(s): Liang, J., Choi, J., Clardy, J.

Revision History

  • 2013-09-18
    Type: Biological assembly | Details: Update assembly based on citation
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4