2EPJ

Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.165

Literature

Macromolecules
Sequence Display for 2EPJ

Classification: ISOMERASE

Total Structure Weight: 46777.58

Macromolecule Entities
Molecule Chains Length Organism Details
Glutamate-1-semialdehyde 2,1-aminomutase A 434 Aeropyrum pernix EC#: 5.4.3.8 IUBMB
Gene Name(s): hemL APE_2299.1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PMP
Query on PMP

A 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
PYRIDOXAMINE-5'-PHOSPHATE (Synonym)
C8 H13 N2 O5 P
ZMJGSOSNSPKHNH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.165
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 61.01 α = 90.00
b = 101.84 β = 90.00
c = 148.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-03-30
  • Released Date: 2007-10-02
  • Deposition author(s): Mizutani, H., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History

  • Version 1_0: 2007-10-02

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Derived calculations, Source and taxonomy, Version format compliance