2DM9

Crystal Structure of PH1978 from Pyrococcus horikoshii OT3

Structural Biology Knowledgebase: 2DM9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.219

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2DM9

Classification: HYDROLASE

Total Structure Weight: 45850.90

Macromolecule Entities
Molecule Chains Length Organism Details
V-type ATP synthase subunit E A, B 198 Pyrococcus horikoshii EC#: 3.6.3.14 IUBMB
Gene Name(s): atpE PH1978

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: Bacterial V-type ATPase

Protein Name: Peripheral stalk of H+-dependent V-ATP Synthase



Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.219
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.20 α = 90.00
b = 55.32 β = 90.00
c = 77.48 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-04-20
  • Released Date: 2007-01-16
  • Deposition author(s): Lokanath, N.K., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4